Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_3414741_3415545_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3414741 - 3415545

Intron Length:

805

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTGCATTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

CCACTCTGACTT

Flanking Amino Acid:

TSLQGHTRVISDLDWAVFEP

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

78.2

31.2

Major BPS

0.62

1.4

85.7

34.9

Major PPT

83.6

0.76

0.8

77.6

35.6

Minor 5ss

27.1

-2.6

42.4

Minor BPS

44.6

-0.3

1.7

54.16

41.9

Associated Gene:

Gene:

WDR59

Ensembl Gene ID:

ENSAPLG00000015680

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034866

3382035 - 3424175

42141

ENSAPLT00000016420

3382035 - 3424175

42141