Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_3418945_3420663_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3418945 - 3420663

Intron Length:

1719

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCCTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAT

U12 Branch Point Sequence:

CTTGTTGTATCT

Flanking Amino Acid:

DCLGQHAVLSGRRFLYIVNL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

72.2

39.5

Major BPS

63.5

0.34

1.4

57.1

49.4

Major PPT

79.4

0.66

0.8

72.7

32.1

Minor 5ss

30.4

-2.2

3.2

31.9

42.5

Minor BPS

44.7

-0.3

2.2

66.05

45.6

Associated Gene:

Gene:

WDR59

Ensembl Gene ID:

ENSAPLG00000015680

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034866

3382035 - 3424175

42141

ENSAPLT00000016420

3382035 - 3424175

42141