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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3478485_3485240_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3478485 - 3485240

Intron Length:

6756

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

GGTCTTTTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

CTTATTTTATGC

Flanking Amino Acid:

SGPASLPTVSGISHRLSAKV

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

74.8

38.1

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

78.2

0.64

0.9

73.1

37.2

Minor 5ss

37.9

-1.4

2.9

40.9

45.3

Minor BPS

46.8

-0.2

1.9

57.64

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015673

3477955 - 3501343

23389