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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3501859_3502203_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3501859 - 3502203

Intron Length:

345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTACGGCAC

5'SS Class:

weak_major

3'SS Sequence:

CCCCTCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

CACGCAGTAACC

Flanking Amino Acid:

VGPITAGILTSAAIAGVYRA

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.2

0.22

1.1

49.1

41.7

Major BPS

54.4

0.11

1.2

36.4

Major PPT

73.6

0.53

0.7

25.5

Minor 5ss

32.2

-2

3.5

46.6

43.1

Minor BPS

43.5

-0.5

2.3

52.05

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014893

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015512

3501342 - 3502334

993