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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3506654_3506745_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3506654 - 3506745

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCCT

5'SS Class:

strong_major

3'SS Sequence:

CCGTGTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAA

U12 Branch Point Sequence:

CCGGGGTGAACG

Flanking Amino Acid:

IDIYWLFDNGGLTLLIPYLL

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

71.4

40.3

Major BPS

61.4

0.28

1.1

67.9

34.4

Major PPT

0.41

0.9

61.3

35.1

Minor 5ss

35.1

-1.7

3.1

48.4

47.3

Minor BPS

35.8

-1.2

2.4

34.86

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035081

3506360 - 3513379

7020