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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3508284_3508409_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3508284 - 3508409

Intron Length:

126

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCCCTGTCC

5'SS Class:

weak_major

3'SS Sequence:

CTTTTTCGGGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAA

U12 Branch Point Sequence:

TTTTTCGGGAAG

Flanking Amino Acid:

LPGEGRSLALGYGKNKNSKW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.5

0.01

1.3

47.7

39.2

Major BPS

53.2

0.08

1.4

65.6

41.4

Major PPT

63.2

0.3

1.2

67.6

38.1

Minor 5ss

22.2

-3.2

31.1

37.3

Minor BPS

44.8

-0.5

2.3

59.77

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035081

3506360 - 3513379

7020