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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3508541_3513333_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3508541 - 3513333

Intron Length:

4793

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTAAGATC

5'SS Class:

major

3'SS Sequence:

GGTTCTTGGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

GGGTCCTGACCG

Flanking Amino Acid:

DEMQPGGWLTEHEHGVGIRS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.6

0.3

1.2

64.1

39.9

Major BPS

68.9

0.47

59.2

39.1

Major PPT

64.8

0.33

1.1

61.4

44.5

Minor 5ss

32.7

-2

3.2

41.3

39.4

Minor BPS

49.1

-0.2

1.9

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035081

3506360 - 3513379

7020