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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3521734_3522659_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3521734 - 3522659

Intron Length:

926

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

CTCCTTTGTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTACAATGAATC

Flanking Amino Acid:

VAAFRNFSDEIRHNLSEVLL

Intron Amino Acid Position:

796

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.6

33.2

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

75.4

0.57

0.9

72.1

32.5

Minor 5ss

39.2

-1.2

2.8

51.8

Minor BPS

46.8

-0.2

1.8

60.62

37.6

Associated Gene:

Gene:

NUP93

Ensembl Gene ID:

ENSAPLG00000014016

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014675

3516658 - 3592549

75892