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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3522744_3523116_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3522744 - 3523116

Intron Length:

373

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTGAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTGAT

U12 Branch Point Sequence:

TTCTTTTTGAAG

Flanking Amino Acid:

HAGHIDRAFDIIERLKLVPL

Intron Amino Acid Position:

768

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

84.3

27.2

Major BPS

76.2

0.65

39.8

Major PPT

83.9

0.76

0.9

86.5

24.8

Minor 5ss

47.2

-0.3

2.8

66.2

38.1

Minor BPS

57.4

0.09

1.5

62.43

40.1

Associated Gene:

Gene:

NUP93

Ensembl Gene ID:

ENSAPLG00000014016

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014675

3516658 - 3592549

75892