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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3525256_3525895_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3525256 - 3525895

Intron Length:

640

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTATC

5'SS Class:

strong_major

3'SS Sequence:

TTAACCTCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

TTAACCTCAACA

Flanking Amino Acid:

EAAKLYDLAKNPDKVLELMN

Intron Amino Acid Position:

689

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

1.1

85.3

32.2

Major BPS

74.2

0.6

39.4

Major PPT

68.4

0.42

Minor 5ss

45.8

-0.4

2.6

41.5

Minor BPS

69.4

0.6

1.6

78.01

Associated Gene:

Gene:

NUP93

Ensembl Gene ID:

ENSAPLG00000014016

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014675

3516658 - 3592549

75892