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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3527254_3527579_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3527254 - 3527579

Intron Length:

326

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TCTGTGGATATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTTAC

U12 Branch Point Sequence:

TTTTTGCTACTT

Flanking Amino Acid:

VSELVIESREFDMILGKLEN

Intron Amino Acid Position:

635

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

71.4

41.2

Major BPS

65.2

0.38

57.3

39.1

Major PPT

63.9

0.31

57.5

42.5

Minor 5ss

45.7

-0.5

2.5

58.3

46.4

Minor BPS

46.1

-0.2

2.5

75.59

41.9

Associated Gene:

Gene:

NUP93

Ensembl Gene ID:

ENSAPLG00000014016

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014675

3516658 - 3592549

75892