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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3527653_3527756_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3527653 - 3527756

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGCC

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

TCCTTGTGAAAA

Flanking Amino Acid:

REALQYFYFLRNEKDSQGEN

Intron Amino Acid Position:

610

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

69.2

36.8

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

85.2

0.79

0.7

81.1

30.9

Minor 5ss

30.3

-2.3

3.5

Minor BPS

45.1

-0.3

2.2

56.5

42.9

Associated Gene:

Gene:

NUP93

Ensembl Gene ID:

ENSAPLG00000014016

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014675

3516658 - 3592549

75892