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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3528311_3529137_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3528311 - 3529137

Intron Length:

827

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTTTCACTAGCT

Flanking Amino Acid:

QFQKQLLEDYGESHFAVNHQ

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.9

31.6

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

88.9

0.88

0.7

88.2

29.1

Minor 5ss

33.9

-1.8

2.9

40.8

39.5

Minor BPS

57.1

0.3

2.2

86.51

38.8

Associated Gene:

Gene:

NUP93

Ensembl Gene ID:

ENSAPLG00000014016

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014675

3516658 - 3592549

75892