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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3530172_3530734_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3530172 - 3530734

Intron Length:

563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCGTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTTTCCTTCATT

Flanking Amino Acid:

FQEYMHSKDRRLSAATENKL

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

1.1

72.4

39.5

Major BPS

79.2

0.73

75.3

39.4

Major PPT

80.3

0.68

0.9

82.3

29.8

Minor 5ss

37.6

-1.4

3.2

49.9

46.3

Minor BPS

79.8

1.02

1.6

95.75

Associated Gene:

Gene:

NUP93

Ensembl Gene ID:

ENSAPLG00000014016

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014675

3516658 - 3592549

75892