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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3537869_3544496_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3537869 - 3544496

Intron Length:

6628

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTTAAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTCTTGTTAAAC

Flanking Amino Acid:

DALDFTQENEPSYAGESGPP

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

1.1

74.6

37.4

Major BPS

71.2

0.53

70.3

31.9

Major PPT

73.4

0.53

69.8

39.6

Minor 5ss

39.5

-1.2

3.1

53.7

43.5

Minor BPS

55.6

0.16

2.1

70.75

40.8

Associated Gene:

Gene:

NUP93

Ensembl Gene ID:

ENSAPLG00000014016

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014675

3516658 - 3592549

75892