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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3544626_3547228_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3544626 - 3547228

Intron Length:

2603

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTCTAT

U12 Branch Point Sequence:

TCTTCCTCAACA

Flanking Amino Acid:

LSAIEESRKRTFAMAEEYHR

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

69.7

43.7

Major BPS

58.6

0.22

1.4

58.5

47.9

Major PPT

77.9

0.63

0.8

73.7

29.9

Minor 5ss

39.2

-1.2

2.8

45.3

Minor BPS

77.6

0.86

1.5

83.78

36.8

Associated Gene:

Gene:

NUP93

Ensembl Gene ID:

ENSAPLG00000014016

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014675

3516658 - 3592549

75892