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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3547292_3590903_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3547292 - 3590903

Intron Length:

43612

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCTG

5'SS Class:

major

3'SS Sequence:

TCCTTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAGAC

U12 Branch Point Sequence:

GGCTTTTAGACT

Flanking Amino Acid:

LEPVKDTDIQGFLKNEKDNA

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

47.1

Major BPS

69.3

0.48

1.1

66.7

Major PPT

88.1

0.86

0.6

24.1

Minor 5ss

-1.9

3.6

46.2

49.1

Minor BPS

48.9

-0

1.7

63.33

41.5

Associated Gene:

Gene:

NUP93

Ensembl Gene ID:

ENSAPLG00000014016

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014675

3516658 - 3592549

75892