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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3591779_3592419_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3591779 - 3592419

Intron Length:

641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTCCGTGCA

5'SS Class:

major

3'SS Sequence:

CTTTTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCAGAT

U12 Branch Point Sequence:

TTTGCTCAGATT

Flanking Amino Acid:

CSALPAVLSLGFCESWVKPA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.3

0.27

1.4

57.1

42.5

Major BPS

61.8

0.29

1.1

58.3

39.2

Major PPT

89.5

0.89

0.6

84.8

22.8

Minor 5ss

26.9

-2.7

24.4

36.7

Minor BPS

46.4

-0.2

70.92

Associated Gene:

Gene:

NUP93

Ensembl Gene ID:

ENSAPLG00000014016

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014675

3516658 - 3592549

75892