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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3615434_3617752_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3615434 - 3617752

Intron Length:

2319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCCACAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTCAT

U12 Branch Point Sequence:

TTTCCCCCACAA

Flanking Amino Acid:

EIVAEMSETETVTALSPMYG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

86.4

23.9

Major BPS

74.4

0.61

1.2

77.7

37.1

Major PPT

63.3

0.3

62.3

33.6

Minor 5ss

41.2

-1

57.8

46.8

Minor BPS

44.4

-0.4

2.1

63.69

41.9

Associated Gene:

Gene:

BBS2

Ensembl Gene ID:

ENSAPLG00000012564

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036185

3615419 - 3633486

18068

ENSAPLT00000026018

3615419 - 3630784

15366

ENSAPLT00000013155

3615017 - 3628740

13724