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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3620267_3621646_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3620267 - 3621646

Intron Length:

1380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTGTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

TTTTTCTGAGTG

Flanking Amino Acid:

QLICCSVDGEVRGYLPGGEE

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

77.8

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

81.5

0.71

0.9

77.1

37.1

Minor 5ss

30.7

-2.2

3.3

39.5

45.9

Minor BPS

57.5

0.1

1.7

67.82

40.2

Associated Gene:

Gene:

BBS2

Ensembl Gene ID:

ENSAPLG00000012564

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036185

3615419 - 3633486

18068

ENSAPLT00000026018

3615419 - 3630784

15366

ENSAPLT00000013155

3615017 - 3628740

13724