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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3622693_3623514_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3622693 - 3623514

Intron Length:

822

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TCTCGTTGCTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

AATTTAGAAACT

Flanking Amino Acid:

HVELCISTTNDTIIRAVLIF

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

36.6

Major BPS

84.4

0.85

34.5

Major PPT

62.1

0.27

1.1

66.7

38.5

Minor 5ss

29.1

-2.4

3.2

37.3

42.5

Minor BPS

44.3

-0.3

2.4

68.18

42.5

Associated Gene:

Gene:

BBS2

Ensembl Gene ID:

ENSAPLG00000012564

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036185

3615419 - 3633486

18068

ENSAPLT00000026018

3615419 - 3630784

15366

ENSAPLT00000013155

3615017 - 3628740

13724