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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3625874_3626399_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3625874 - 3626399

Intron Length:

526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAG

U12 Branch Point Sequence:

GAGCCTTTAAGT

Flanking Amino Acid:

LFIKIKSGGEISISTDDIDL

Intron Amino Acid Position:

355

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

86.6

22.3

Major BPS

63.3

0.33

1.6

73.3

39.1

Major PPT

78.5

0.64

0.9

75.5

33.1

Minor 5ss

30.6

-2.2

2.6

35.8

41.1

Minor BPS

56.1

0.27

1.7

67.28

43.3

Associated Gene:

Gene:

BBS2

Ensembl Gene ID:

ENSAPLG00000012564

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036185

3615419 - 3633486

18068

ENSAPLT00000026018

3615419 - 3630784

15366