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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3625874_3627012_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3625874 - 3627012

Intron Length:

1139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTGGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTCATGAATT

Flanking Amino Acid:

LFIKIKSGGEVDEHHSVNQR

Intron Amino Acid Position:

383

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

86.6

22.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

74.1

0.54

Minor 5ss

30.6

-2.2

2.6

35.8

41.1

Minor BPS

0.52

1.7

82.16

39.2

Associated Gene:

Gene:

BBS2

Ensembl Gene ID:

ENSAPLG00000012564

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013155

3615017 - 3628740

13724