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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3626538_3627012_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3626538 - 3627012

Intron Length:

475

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTGGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTCATGAATT

Flanking Amino Acid:

FEELKKVLVKVDEHHSVNQR

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

74.7

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

74.1

0.54

Minor 5ss

26.2

-2.7

2.9

29.6

43.4

Minor BPS

0.52

1.7

82.16

39.2

Associated Gene:

Gene:

BBS2

Ensembl Gene ID:

ENSAPLG00000012564

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036185

3615419 - 3633486

18068

ENSAPLT00000026018

3615419 - 3630784

15366