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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3627126_3627805_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3627126 - 3627805

Intron Length:

680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGCAGT

5'SS Class:

major

3'SS Sequence:

ATTGTTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAC

U12 Branch Point Sequence:

ATTCAACTAACT

Flanking Amino Acid:

QAEDARLLGDMKNMKKRYIE

Intron Amino Acid Position:

420

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

70.8

Major BPS

0.45

0.9

67.6

25.3

Major PPT

75.5

0.57

0.9

66.7

Minor 5ss

38.1

-1.3

3.1

53.3

43.9

Minor BPS

48.8

-0

2.1

75.78

39.6

Associated Gene:

Gene:

BBS2

Ensembl Gene ID:

ENSAPLG00000012564

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036185

3615419 - 3633486

18068

ENSAPLT00000026018

3615419 - 3630784

15366

ENSAPLT00000013155

3615017 - 3628740

13724