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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3634515_3634798_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3634515 - 3634798

Intron Length:

284

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGCCTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTCCCTTACTC

Flanking Amino Acid:

SYIAKGEDEELLTVNPEDNC

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

75.2

0.57

0.9

66.6

40.6

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

70.5

0.62

1.6

79.77

35.4

Associated Gene:

Gene:

OGFOD1

Ensembl Gene ID:

ENSAPLG00000012283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012802

3634353 - 3642468

8116