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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3635833_3637156_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3635833 - 3637156

Intron Length:

1324

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTCCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

TTCCCTGGCATT

Flanking Amino Acid:

PEAQDSETQNGSSTPVCAGE

Intron Amino Acid Position:

425

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.2

36.5

Major BPS

78.6

0.71

79.6

32.9

Major PPT

73.7

0.53

0.7

68.9

Minor 5ss

32.2

-2

3.1

37.6

42.2

Minor BPS

40.4

-0.6

2.3

61.4

43.3

Associated Gene:

Gene:

OGFOD1

Ensembl Gene ID:

ENSAPLG00000012283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012802

3634353 - 3642468

8116