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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3650719_3652082_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3650719 - 3652082

Intron Length:

1364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGGCCC

5'SS Class:

major

3'SS Sequence:

TATTCCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

TATTCGTTACTG

Flanking Amino Acid:

FLLADSLCVWVLVNTACCFL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

57.4

41.8

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

0.77

0.8

77.9

30.4

Minor 5ss

26.1

-2.7

36.4

Minor BPS

-0.1

2.3

64.11

44.2

Associated Gene:

Gene:

AMFR

Ensembl Gene ID:

ENSAPLG00000011375

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011911

3650500 - 3678366

27867