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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3652176_3653951_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3652176 - 3653951

Intron Length:

1776

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

ATGGCAGTAACC

Flanking Amino Acid:

FGPLRVSERQHLKDKFWNFI

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.1

35.1

Major BPS

87.6

0.93

0.9

89.3

Major PPT

90.2

0.9

0.6

88.3

21.4

Minor 5ss

29.8

-2.3

3.3

37.5

47.2

Minor BPS

46.6

-0.2

2.3

61.64

43.7

Associated Gene:

Gene:

AMFR

Ensembl Gene ID:

ENSAPLG00000011375

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011911

3650500 - 3678366

27867