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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3660936_3661405_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3660936 - 3661405

Intron Length:

470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGAAAT

5'SS Class:

major

3'SS Sequence:

TTCTTTCCCAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TCTTTCCCAAAG

Flanking Amino Acid:

LDLMHHIHMLLFGNIWLSMA

Intron Amino Acid Position:

269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

75.1

34.1

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

73.1

0.52

74.8

27.9

Minor 5ss

41.4

-1

2.9

54.4

Minor BPS

46.9

-0.3

57.32

43.9

Associated Gene:

Gene:

AMFR

Ensembl Gene ID:

ENSAPLG00000011375

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011911

3650500 - 3678366

27867