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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3670465_3671551_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3670465 - 3671551

Intron Length:

1087

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

GCTTGCGTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

CTGTATTAAACC

Flanking Amino Acid:

GRIQVPFPTQRVENVRPATN

Intron Amino Acid Position:

494

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.6

1.05

0.7

81.4

32.7

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

73.7

0.53

41.9

Minor 5ss

34.5

-1.8

2.9

43.8

43.9

Minor BPS

50.6

-0

1.9

62.47

43.4

Associated Gene:

Gene:

AMFR

Ensembl Gene ID:

ENSAPLG00000011375

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011911

3650500 - 3678366

27867