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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3671636_3676489_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3671636 - 3676489

Intron Length:

4854

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTGG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATAAA

U12 Branch Point Sequence:

TTTTCCTCTCTC

Flanking Amino Acid:

DQEDTETVTQTERVPLELNS

Intron Amino Acid Position:

522

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

1.1

69.7

43.7

Major BPS

66.3

0.4

1.1

34.4

Major PPT

93.6

0.98

0.6

92.3

Minor 5ss

45.1

-0.5

2.6

58.7

45.8

Minor BPS

41.6

-0.6

3.7

70.76

Associated Gene:

Gene:

AMFR

Ensembl Gene ID:

ENSAPLG00000011375

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011911

3650500 - 3678366

27867