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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3685904_3704915_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3685904 - 3704915

Intron Length:

19012

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTGCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCTC

U12 Branch Point Sequence:

TCTCCTCTCTCT

Flanking Amino Acid:

DQVLHEDETTNRMHESLMLF

Intron Amino Acid Position:

451

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

33.6

-1

4.2

71.3

36.7

Major PPT

74.6

0.55

0.8

68.4

31.8

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

35.7

-1

3.6

65.58

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011027

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020865

3683409 - 3811780

128372