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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3729111_3769569_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3729111 - 3769569

Intron Length:

40459

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAC

U12 Branch Point Sequence:

TCCGTCTGACCT

Flanking Amino Acid:

GIEYGDKERRADAKMVCDVV

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

76.3

30.6

Major BPS

63.7

0.34

1.2

41.8

Major PPT

82.8

0.74

0.7

Minor 5ss

33.6

-1.9

2.8

31.7

42.6

Minor BPS

47.5

-0.1

1.9

63.41

47.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011027

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020865

3683409 - 3811780

128372

ENSAPLT00000020797

3697051 - 3811780

114730

ENSAPLT00000011491

3694375 - 3811780

117406

ENSAPLT00000044539

3697051 - 3811780

114730