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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3811036_3811125_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3811036 - 3811125

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

TCTGTCCCGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTTAT

U12 Branch Point Sequence:

CCTCCCTTATTC

Flanking Amino Acid:

AAKDVKLLLLGAGESGKSTI

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

57.1

42.2

Major BPS

66.5

0.41

1.1

57.2

40.1

Major PPT

70.2

0.46

65.4

36.3

Minor 5ss

34.2

-1.8

44.2

43.2

Minor BPS

57.6

0.22

1.7

63.26

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011027

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044539

3697051 - 3811780

114730

ENSAPLT00000011491

3694375 - 3811780

117406