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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3922855_3926466_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3922855 - 3926466

Intron Length:

3612

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TTTTGTTTTACA

Flanking Amino Acid:

KNVQVLYSEQSPLSHDLILN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.7

81.3

32.8

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

92.5

0.96

0.7

87.5

Minor 5ss

30.6

-2.2

2.6

36.7

40.4

Minor BPS

61.2

0.34

2.1

78.96

37.6

Associated Gene:

Gene:

C16orf70

Ensembl Gene ID:

ENSAPLG00000005424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034853

3918003 - 3951103

33101

ENSAPLT00000005663

3922578 - 3950734

28157