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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3930928_3931211_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3930928 - 3931211

Intron Length:

284

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

ATACTCTTAAGA

Flanking Amino Acid:

YDLTKVKLKYCGVHFNSQAI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

74.1

36.5

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

96.8

1.05

0.5

96.1

13.2

Minor 5ss

38.1

-1.3

3.4

52.2

Minor BPS

60.4

0.32

1.6

67.86

38.2

Associated Gene:

Gene:

C16orf70

Ensembl Gene ID:

ENSAPLG00000005424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034853

3918003 - 3951103

33101

ENSAPLT00000005663

3922578 - 3950734

28157