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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3931292_3935883_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3931292 - 3935883

Intron Length:

4592

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCCAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCGTAA

U12 Branch Point Sequence:

ATTTTCGTAACT

Flanking Amino Acid:

DQSFGATHPGVYNSAEQLFH

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.9

74.1

38.3

Major BPS

57.3

0.18

1.4

57.7

41.3

Major PPT

89.8

0.9

0.6

89.2

19.6

Minor 5ss

37.2

-1.4

48.3

Minor BPS

69.9

0.7

89.83

34.4

Associated Gene:

Gene:

C16orf70

Ensembl Gene ID:

ENSAPLG00000005424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034853

3918003 - 3951103

33101

ENSAPLT00000005663

3922578 - 3950734

28157