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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3935979_3938470_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3935979 - 3938470

Intron Length:

2492

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGCAAT

5'SS Class:

major

3'SS Sequence:

TCTGTATCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAC

U12 Branch Point Sequence:

TTTTCTGTATCT

Flanking Amino Acid:

DSWTETPKYEPNFAHGLASL

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.3

77.9

38.6

Major BPS

75.8

0.64

0.9

75.6

25.3

Major PPT

0.68

0.9

73.8

35.8

Minor 5ss

36.5

-1.5

2.9

48.8

Minor BPS

60.5

0.41

2.2

87.39

38.7

Associated Gene:

Gene:

C16orf70

Ensembl Gene ID:

ENSAPLG00000005424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005663

3922578 - 3950734

28157

ENSAPLT00000034853

3918003 - 3951103

33101