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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3938569_3940264_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3938569 - 3940264

Intron Length:

1696

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTACGTACA

5'SS Class:

major

3'SS Sequence:

CAATTGGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTTAT

U12 Branch Point Sequence:

TTATCTGCATCT

Flanking Amino Acid:

IYNGNSLQDTKAPLMPLSCF

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

74.6

35.6

Major BPS

73.7

0.59

1.2

65.7

43.2

Major PPT

69.8

0.45

65.3

Minor 5ss

36.7

-1.5

2.9

43.3

37.8

Minor BPS

46.3

-0.2

2.3

72.81

44.2

Associated Gene:

Gene:

C16orf70

Ensembl Gene ID:

ENSAPLG00000005424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005663

3922578 - 3950734

28157

ENSAPLT00000034853

3918003 - 3951103

33101