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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3940378_3942677_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3940378 - 3942677

Intron Length:

2300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACACTCA

5'SS Class:

major

3'SS Sequence:

TTCTGCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

GACTTCTGAGTT

Flanking Amino Acid:

SGLRLRLLTAGCGPGVLADA

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

62.1

39.3

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

77.5

0.62

0.8

69.3

36.9

Minor 5ss

42.4

-0.8

3.1

47.2

Minor BPS

48.6

-0

1.7

62.42

41.8

Associated Gene:

Gene:

C16orf70

Ensembl Gene ID:

ENSAPLG00000005424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034853

3918003 - 3951103

33101

ENSAPLT00000005663

3922578 - 3950734

28157