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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3943608_3944323_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3943608 - 3944323

Intron Length:

716

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

TTTTCTTCAACA

Flanking Amino Acid:

YFFNYFTLGVDILFDANTHK

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

70.5

41.3

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

84.5

0.78

0.8

81.6

28.9

Minor 5ss

29.8

-2.3

2.6

30.3

36.7

Minor BPS

78.6

0.89

1.4

87.68

29.9

Associated Gene:

Gene:

C16orf70

Ensembl Gene ID:

ENSAPLG00000005424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034853

3918003 - 3951103

33101

ENSAPLT00000005663

3922578 - 3950734

28157