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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3944407_3945166_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3944407 - 3945166

Intron Length:

760

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTCTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TGCTTTCTGACA

Flanking Amino Acid:

TNYPGHYNFNIYHRCEFKIP

Intron Amino Acid Position:

316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

79.6

28.3

Major BPS

84.6

0.86

41.2

Major PPT

80.7

0.69

0.8

73.6

Minor 5ss

33.2

-1.9

3.4

44.6

43.6

Minor BPS

50.7

0.02

1.6

62.92

37.4

Associated Gene:

Gene:

C16orf70

Ensembl Gene ID:

ENSAPLG00000005424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034853

3918003 - 3951103

33101

ENSAPLT00000005663

3922578 - 3950734

28157