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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3947282_3948593_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3947282 - 3948593

Intron Length:

1312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

GACATCCTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTGATTTTAATA

Flanking Amino Acid:

QTETCTTYSKWDSIQDLLGH

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.8

81.8

38.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.2

0.46

39.4

Minor 5ss

37.8

-1.4

49.5

46.7

Minor BPS

59.8

0.3

1.3

62.67

38.6

Associated Gene:

Gene:

C16orf70

Ensembl Gene ID:

ENSAPLG00000005424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034853

3918003 - 3951103

33101

ENSAPLT00000005663

3922578 - 3950734

28157