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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3948653_3950089_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3948653 - 3950089

Intron Length:

1437

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTCT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCTGTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

ACATGTCCAATT

Flanking Amino Acid:

HPVEKPVVLHRSSSPNNTNP

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.5

34.8

Major BPS

72.4

0.56

73.5

32.5

Major PPT

81.3

0.7

0.9

80.1

Minor 5ss

38.7

-1.3

3.4

56.7

47.6

Minor BPS

41.4

-0.5

2.1

55.76

40.9

Associated Gene:

Gene:

C16orf70

Ensembl Gene ID:

ENSAPLG00000005424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034853

3918003 - 3951103

33101

ENSAPLT00000005663

3922578 - 3950734

28157