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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3984394_3986724_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3984394 - 3986724

Intron Length:

2331

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGAAG

5'SS Class:

strong_major

3'SS Sequence:

TGTGATTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCTAT

U12 Branch Point Sequence:

TGTCTCTCAGCC

Flanking Amino Acid:

ALRPGGSGCRRVLKMAGSSA

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

39.3

Major BPS

61.2

0.28

1.4

60.7

45.4

Major PPT

72.6

0.51

0.9

66.5

40.4

Minor 5ss

-2.2

3.2

38.7

46.6

Minor BPS

50.2

-0

1.8

40.1

Associated Gene:

Gene:

TRADD

Ensembl Gene ID:

ENSAPLG00000028061

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039688

3976011 - 3987092

11082