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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3997139_3997923_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3997139 - 3997923

Intron Length:

785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTTCA

5'SS Class:

major

3'SS Sequence:

GCTCTCTATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAC

U12 Branch Point Sequence:

TGCTCTCTATGC

Flanking Amino Acid:

MASFVRQLNMYGFRKVVNIE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

70.6

36.1

Major BPS

69.9

0.5

31.5

Major PPT

75.2

0.57

0.9

69.4

35.8

Minor 5ss

42.5

-0.8

2.7

51.5

44.9

Minor BPS

-0.4

2.1

55.18

43.3

Associated Gene:

Gene:

HSF4

Ensembl Gene ID:

ENSAPLG00000005338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005556

3993939 - 4015138

21200