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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3998052_3999610_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3998052 - 3999610

Intron Length:

1559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAC

U12 Branch Point Sequence:

TGTTGGTAAAAT

Flanking Amino Acid:

EHLLEHIKRKVSVVKSEETK

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

73.5

0.58

0.9

75.4

28.3

Major PPT

89.3

0.88

0.6

88.8

20.5

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

43.5

-0.4

2.6

69.63

46.9

Associated Gene:

Gene:

HSF4

Ensembl Gene ID:

ENSAPLG00000005338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005556

3993939 - 4015138

21200