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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4002496_4003825_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4002496 - 4003825

Intron Length:

1330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTGGTT

5'SS Class:

major

3'SS Sequence:

TCTCTCCTGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TGCTGATTAACA

Flanking Amino Acid:

HSQQQKVINKLIQFLFGQLQ

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

69.7

40.9

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

76.2

0.59

0.9

72.3

32.5

Minor 5ss

33.8

-1.8

55.1

49.2

Minor BPS

55.5

0.17

2.1

69.26

42.8

Associated Gene:

Gene:

HSF4

Ensembl Gene ID:

ENSAPLG00000005338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005556

3993939 - 4015138

21200