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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4006313_4007068_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4006313 - 4007068

Intron Length:

756

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAGGTTTA

5'SS Class:

major

3'SS Sequence:

GCTTTCCTCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATTAT

U12 Branch Point Sequence:

TCTGTATTATTT

Flanking Amino Acid:

PLHDPYFIQSPSTEPASCLN

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

75.4

37.3

Major BPS

0.42

1.3

60.1

46.3

Major PPT

75.6

0.58

0.8

73.6

31.4

Minor 5ss

42.9

-0.8

3.1

57.9

46.7

Minor BPS

48.2

-0

1.9

67.89

43.7

Associated Gene:

Gene:

HSF4

Ensembl Gene ID:

ENSAPLG00000005338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005556

3993939 - 4015138

21200